Installation

How to install scMethtools¶

Install conda from miniconda or anaconda¶

To avoid potential conflicts with other packages, we strongly recommend you to use a conda environment. If you do not have a working installation or Python 3.7 (or later), consider installing Miniconda ( see Installing Miniconda).

Using such an isolated environment makes it possible to install a specific version of ALLCools with pip or conda and its dependencies independently of any previously installed Python packages.

Note that you should always remember to activate the environment of your choice prior to running any Python command whenever you start a new terminal session.

conda init¶

Text Only

    # e.g., bash or zsh
    conda init bash
    # you need to restart shell after conda init

Pip install¶

Text Only

pip install scmethq

依赖¶

Installation Required Python Packages

Python (version >= 3.6) numpy (version >= 1.15.4) scipy (version >= 1.0) matplotlib (version >=3.1.1) pandas (version >=0.19) simplejson six h5py ** interactive_scatter feature requirement**

plotly (version >= 4.8.0)